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Software

Selecting a package name in the left column of the table expands the entry with a short description. A green icon links to the home page of the software. Any pages describing a given installation are linked from the corresponding available version.

  • Version number: The software is installed on the machine with the version(s) listed available.
  • x: The software is installed on the machine, but version information is not available.

Please contact the support staff for the system in question for information about the availability of application software that is not listed here, especially if you consider to apply for access to this system.

Basic software

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ANTLR   2.7.7
2.7.7
2.7.7
  
ANTLR, ANother Tool for Language Recognition, is a language tool that provides a framework for constructing recognizers, interpreters, compilers, and translators from grammatical descriptions containing actions in a variety of target languages.
chapel   1.3.0
1.2.1
1.1.1
1.1.1
1.0
0.9
1.2.0
  
Chapel is a new parallel programming language being developed by Cray Inc.
CrayPat   5.1.3
5.1.2
5.0.1
N.A.
   
Cray Performance Analysis Tool. Evaluates program execution on Cray systems.
cuda     3.2.16
4.0.17
 
CUDA is NVIDIA\'s parallel computing architecture.
g95    0.93-32b
0.93
   093
 
A free, open source Fortran 95/2003 compiler and runtime libraries.
gnuplot   4.4.2
4.2.5
4.4.3
  4.4.2
4.2.5
 
Gnuplot is a portable command-line driven graphing utility.
HDF5   1.8.5.0
1.8.4.1
1.8.3.1
1.6.7a
5-1.8.5p1
5-1.6.5
5-1.6.10
  1.8.7
1.8.4.patch1
1.8.1
 
HDF5 is a data model, library, and file format for storing and managing data.
hdfview       2.5
 
HDFView is a visual tool for browsing and editing HDF4 and HDF5 files.
hpn-ssh     5.1p1-hpn13v5
  
High Performance SSH/SCP
IHPCT    2.2.2
   
IBM High Performance Computing Toolkit
Intel compilers     12.0.4
11.1_ia32
11.1.072
11.1
11.0
10.1
10.0
  
Intel® Compilers help Linux* software run at top speeds. Using Intel Compilers for Linux, developers can write high-performance software for desktops and servers. These compilers are compatible with existing development environments on Linux, so it's easy to start using them. Intel compilers
LoadLeveler    3.5.0.5
   
LoadLeveler is the workload manager on the Regatta. CXperf
Modules   3.1.6.6
3.2.7
   
Provides dynamic modification of a user's environment via modulefiles.
MPI    poe
   
MPI (Message Passing Library) is a widely used standard for writing message-passing programs. The interface attempts to establish a practical, portable, efficient, and flexible standard for message passing. MPI
Mpiexec      0.83
0.82
  
Mpiexec is a replacement program for the script mpirun, which is part of the mpich package. It is used to initialize a parallel job from within a PBS batch or interactive environment. Mpiexec
NCARG    4.4.0
5.0.0
   
NCAR Graphics
NCO   4.0.7-login
4.0.5
4.0.0
3.9.6
3.9.1
3.1.8
4.0.5
  
The netCDF Operators, or NCO, are a suite of programs known as operators. The operators take netCDF files as input, then perform a set of operations (e.g., deriving new data, averaging, hyperslabbing, or metadata manipulation) and produce a netCDF file as output.NCO
ncview   2.0beta4
1.93g
    
Ncview is a visual browser for netCDF format files.ncview
NetCDF   4.1.1.0
4.0.1.3
4.0.1.1
3.6.2
4.1.1
3.6.3_u
3.6.2
3.6.1
4.1.1
3.6.2
4.1.1
4.0.1.intel
 
NetCDF (network Common Data Form) is an interface for array-oriented data access and a library that provides an implementation of the interface. The netCDF library also defines a machine-independent format for representing scientific data.NetCDF
OpenMPI    poe
1.4
1.3.3_gfortran44
1.3.3_gfortran
1.3.3_10.1
1.3.3
1.3.2_nodso
1.3.2
1.2.8
1.2.4
1.4.intel.icc
1.4.3.open64
1.4.3.pgi
1.4.intel
1.4.3.intel.test
1.4.3.intel
1.4.3.gnu32
1.4.3.gnu
1.4.2.intel
1.4.1.intel
1.4.1.gnu
1.3.3.pgi
1.3.3.intel
1.3.3.intel.ipath
1.3.3.gnu
1.2.8.intel
1.2.8.gnu
 
Open MPI is a project combining technologies and resources from several other projects (FT-MPI, LA-MPI, LAM/MPI, and PACX-MPI) in order to build the best MPI library available. A completely new MPI-2 compliant implementation.OpenMPI
paraview   3.6.1
   3.6.1
3.4
 
ParaView is an open-source, multi-platform data analysis and visualization application.
PBS/Torque    LoadLeveler
   
PBS Pro (Portable Batch System) is the workload manager on the HP installations. Link to Maui, the advanced job scheduler. Link to OpenPBS. PBS
Perl   5.8.8-dyn
5.8.2.1
  1.6
1.7
1.0
 
Scripting language of choice for most CGI scripts. Perl
PETSc   3.1.08
3.1.05
3.1.04
3.0.0.10
2.3.3a
3.0.0.11-complex
3.0.0.11-real
3.1.101122-complex
3.1.101122-real
2.3.3.3
2.3.2.8
2.3.2.3
petsc-3.1-p2
3.1-p8
 
PETSc is a suite of data structures and routines for the scalable (parallel) solution of scientific applications modeled by partial differential equations. It employs the MPI standard for all message-passing communication.PETSc
Python   2.7.1-dso
2.6.5-dynamic-exper
2.6.2
3.1.1
2.6.3
2.5.0
2.7.1
2.6.2_local
2.6.2_intel
2.6.2
2.5.1
3.1.1
2.7.gcc45
2.7
2.6.2
 
Python, an interpreted, interactive, object-oriented, extensible programming language. Link to a tutorial. Python
Ruby      1.9.2
1.9.1
 
Ruby is a dynamic, reflective, general purpose object-oriented programming language.
scampi      5.6.1
 
Scali MPI Connect. Discontinued.
Subversion   1.6.2
1.6.9
1.4.2
1.4.3
   
Subversion version control system clients
TotalView   8.9.1
8.9.0
8.8.0a
8.7.0
8.6.0
8.6.2-0
8T.6.0-1
8.0.1-0
8.6.1-1
8.6.0-2
8.3.0-1
  
TotalView, a source- and machine-level debugger with support for Fortran, C, C++, OpenMP, MPI, and threads. TotalView
valgrind     3.5.0
3.6.0
3.5.0
 
Valgrind is an instrumentation framework for building dynamic analysis tools. There are Valgrind tools that can automatically detect many memory management and threading bugs, and profile your programs in detail. You can also use Valgrind to build new tools.
VPA    4.0.0
   
Visual Performance Analyzer (VPA) is an Eclipse-based performance visualization toolkit.
XLC    11.1.0.4
9.0.0.0
   
XL C is a standards-based, high performance C compiler with advanced optimizing and debugging features.
XLF    13.1.0.4
11.1.0.0
   
XL Fortran